Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTACGGCTCGCTCGTCTCGGCCGGGGACGCGCTGCAACAGCGGCTGCAGG
((((((((((.((((((..((&.))..)))))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173803
GeneSymbolMPV17L
Binding site209,262
Score0.846
Seed1
Au0.235
Energy-27.0
Binding len23
Me-6.762
Phylopstem0.5194643099999999
Phylopflank0.26033375625000005
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure