Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGGCAGCCGCGGAGAGAGAGAAGATTATAAATGGCAGA
((((..((((((((((.((((&)))).)))))))))).....................)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173811
GeneSymbolHARBI1
Binding site85,126
Score0.846
Seed0
Au0.529
Energy-23.0
Binding len41
Me-9.958
Phylopstem0.21514223999999996
Phylopflank0.20444879300000002
Longest consecutive pairings10
Position of longest consecutive pairings26
Pairings in 3prime end7
Position5UTR
2D Structure