Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCTACAGTGTGCCAA
...((((((((..(((((((..&))))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_173814
GeneSymbolPRTG
Binding site9696,9712
Score0.846
Seed0
Au0.559
Energy-19.4
Binding len16
Me-11.15
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure