Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CCCAGGGAGGCCTATGAGGGCTGCTGTGAGGCCTGTGA
(((.((((((((((((((....&))))))))))...................)))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_173821
GeneSymbolRTP5
Binding site433,471
Score1.0
Seed0
Au0.324
Energy-23.7
Binding len38
Me-6.97
Phylopstem0.8381767787878786
Phylopflank0.7089918100000001
Longest consecutive pairings10
Position of longest consecutive pairings28
Pairings in 3prime end4
PositionCDS
2D Structure