Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCACCTAGGCTGGAGTGCAGTGG
((((((((((..(((((((.((&)))))))))..))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_173827
GeneSymbolCOX18
Binding site2081,2104
Score0.923
Seed1
Au0.412
Energy-24.6
Binding len23
Me-10.109
Phylopstem-0.13330952727272727
Phylopflank-0.15653416499999998
Longest consecutive pairings9
Position of longest consecutive pairings14
Pairings in 3prime end7
Position3UTR
2D Structure