Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTACGGGGTGCTGTCACGCTGCC
..(((((((((((((((((((&))))))))....)))).)).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173827
GeneSymbolCOX18
Binding site340,366
Score0.846
Seed1
Au0.368
Energy-22.3
Binding len26
Me-4.957
Phylopstem2.4738286079999994
Phylopflank3.8418996575
Longest consecutive pairings8
Position of longest consecutive pairings18
Pairings in 3prime end8
PositionCDS
2D Structure