Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGGGCTCTGCAGCCCCTTGCCTCCATTGCAGCCGCAGCA
.....((((((((((((((((&.))))....)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173828
GeneSymbolRELL2
Binding site1602,1644
Score0.846
Seed0
Au0.338
Energy-25.8
Binding len22
Me-13.666
Phylopstem0.250604855
Phylopflank-0.2651187365
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure