Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTACATGCTAGGA
.(((((((.....((((((...&))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001349370
GeneSymbolSETD2
Binding site8309,8323
Score0.846
Seed1
Au0.618
Energy-16.2
Binding len14
Me-13.553
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure