Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTACCATTTTAAGTTCTTAGGAACAGGAGGAAGGAGTCGTGTGT
(((((((((((((((.(((((.&)))))......................)))))))))))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_173829
GeneSymbolSREK1IP1
Binding site4109,4153
Score0.846
Seed1
Au0.574
Energy-23.1
Binding len44
Me-4.171
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings5
Pairings in 3prime end6
Position3UTR
2D Structure