Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTACTGGGAGAAAAAATACAGAGCCAGTA
.((((((((.(((((.(((((.&))))).))))).........)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_173829
GeneSymbolSREK1IP1
Binding site2346,2375
Score1.0
Seed1
Au0.588
Energy-21.2
Binding len29
Me-5.269
Phylopstem0.037885149999999986
Phylopflank0.7268785462499999
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure