Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGTAGCAACCTCACAGCTGTG
..(((((((.((((((..(((&)))...))))))...))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173830
GeneSymbolCEP57L1
Binding site4447,4470
Score0.846
Seed1
Au0.544
Energy-20.4
Binding len23
Me-6.2
Phylopstem-0.237595
Phylopflank0.13650789250000012
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure