Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGGCTGAATGAGAGCTTCCGGGACTTGCAGCTGCGGCTGCT
..(((((((((((((((((..&.))))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173833
GeneSymbolSCARA5
Binding site727,770
Score0.923
Seed1
Au0.338
Energy-31.8
Binding len19
Me-4.957
Phylopstem-0.8826578588235294
Phylopflank0.6866132112499999
Longest consecutive pairings17
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure