Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCCAAGCTCCATCTCCACTCCAGATTTTTTACAGCTGCCTGCAGT
((((((..((((((((((((.&.)))))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173841
GeneSymbolIL1RN
Binding site1335,1383
Score0.923
Seed0
Au0.544
Energy-21.2
Binding len20
Me-7.795
Phylopstem-0.0577691
Phylopflank0.3901534000000001
Longest consecutive pairings18
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure