Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TGCAGCCGCAGCCGCC
..((.((((((((((((....&)))))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001349370
GeneSymbolSETD2
Binding site199,215
Score0.923
Seed0
Au0.324
Energy-25.3
Binding len16
Me-9.076
Phylopstem3.602685833333334
Phylopflank2.527607505
Longest consecutive pairings12
Position of longest consecutive pairings4
Pairings in 3prime end4
Position5UTR
2D Structure