Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCCAAGCTCCATCTCCACTCCAGATTTTTTACAGCTGCCTGCAGT
((((((..((((((((((((.&.)))))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173842
GeneSymbolIL1RN
Binding site1305,1353
Score0.846
Seed0
Au0.544
Energy-21.2
Binding len20
Me-7.795
Phylopstem0.17415745833333332
Phylopflank-0.16434173374999997
Longest consecutive pairings18
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure