Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCCAAGCTCCATCTCCACTCCAGATTTTTTACAGCTGCCTGCAGT
((((((..((((((((((((.&.)))))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173843
GeneSymbolIL1RN
Binding site1443,1491
Score0.923
Seed0
Au0.544
Energy-21.2
Binding len20
Me-7.795
Phylopstem-0.16896074166666672
Phylopflank-0.26430780749999994
Longest consecutive pairings18
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure