Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGATCATGTTGTTGGCCCTGGTC
(((.(((..(((((((.(((((&))))))))))))..)))..))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_173847
GeneSymbolSPACA3
Binding site294,317
Score0.846
Seed0
Au0.368
Energy-16.8
Binding len23
Me-10.34
Phylopstem4.881645714285715
Phylopflank3.991464588749999
Longest consecutive pairings12
Position of longest consecutive pairings11
Pairings in 3prime end7
PositionCDS
2D Structure