Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGGTTTCAACGCAGCTGCT
..((((((((.((((....((&)).....)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173847
GeneSymbolSPACA3
Binding site459,479
Score1.0
Seed1
Au0.485
Energy-20.1
Binding len20
Me-8.015
Phylopstem2.721116125
Phylopflank2.4424701887499998
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure