Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGCCCGGCCGCGCTGCAAG
(((((((.(((((((...(((&)))...)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173849
GeneSymbolGSC
Binding site134,155
Score0.846
Seed1
Au0.309
Energy-26.6
Binding len21
Me-6.484
Phylopstem1.0285005142857142
Phylopflank2.07759774125
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure