Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGTGAGTTCAACAACAACGACAACAACAGCCGCAGCTCAT
.((.((((((((((((.....&.)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173851
GeneSymbolSLC30A8
Binding site281,323
Score0.923
Seed0
Au0.515
Energy-23.6
Binding len16
Me-6.825
Phylopstem4.940857833333332
Phylopflank1.9296627999999996
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end3
Position5UTR
2D Structure