Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGATGTACAGCCGTCAGCTGG
...((((((((((((((....&.)))))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173852
GeneSymbolKRTCAP2
Binding site148,171
Score0.846
Seed0
Au0.382
Energy-23.4
Binding len17
Me-6.515
Phylopstem-0.009485326666666676
Phylopflank0.45253275875
Longest consecutive pairings8
Position of longest consecutive pairings8
Pairings in 3prime end4
PositionCDS
2D Structure