Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGAAAGACTGCAGAGCTGCC
..((((((((((((...((((&)))).....)))))))..))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001349376
GeneSymbolZDHHC3
Binding site1842,1866
Score0.923
Seed1
Au0.412
Energy-21.4
Binding len24
Me-5.925
Phylopstem5.299278857142857
Phylopflank4.109095259999999
Longest consecutive pairings7
Position of longest consecutive pairings8
Pairings in 3prime end5
Position3UTR
2D Structure