Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCAGAGAGCCGCGGCGCC
..((.(((((((((.(..((.&))..).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001349376
GeneSymbolZDHHC3
Binding site96,114
Score0.846
Seed0
Au0.25
Energy-21.4
Binding len18
Me-9.811
Phylopstem5.203017777777777
Phylopflank3.7793723375
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end4
Position5UTR
2D Structure