Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGAGGGTGGAGGGTCA
.((((((.((.((((((....&)))))))).)))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_173860
GeneSymbolHOXC12
Binding site1348,1364
Score1.0
Seed1
Au0.412
Energy-25.1
Binding len16
Me-8.932
Phylopstem-0.21247249999999998
Phylopflank-0.09719706249999997
Longest consecutive pairings8
Position of longest consecutive pairings8
Pairings in 3prime end4
Position3UTR
2D Structure