Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCGTTGCCTGCGGTGGCTGCAGG
((((((((((.((.((((((.&)).))))..)).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173860
GeneSymbolHOXC12
Binding site1662,1685
Score0.923
Seed1
Au0.338
Energy-22.5
Binding len23
Me-7.619
Phylopstem0.07305489999999999
Phylopflank-0.03847040000000004
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure