Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGGCAGCTGCCTGCGGT
((((((..((((((((..(((&))).)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173860
GeneSymbolHOXC12
Binding site1100,1119
Score0.846
Seed0
Au0.309
Energy-20.7
Binding len19
Me-7.795
Phylopstem-0.21247212500000004
Phylopflank-0.2168817862500001
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure