Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTATGGCTGCAGTC
.....(((((((((((((((.&))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173872
GeneSymbolCLCN3
Binding site2328,2344
Score1.0
Seed0
Au0.529
Energy-22.0
Binding len16
Me-13.666
Phylopstem0.003458340000000009
Phylopflank0.029511341249999986
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure