Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTATCAGCTGCCTCAGCTGCAGG
(((((((((.(((.((.....&.)).))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173872
GeneSymbolCLCN3
Binding site1440,1464
Score0.923
Seed1
Au0.515
Energy-21.8
Binding len18
Me-6.037
Phylopstem-0.3596245555555556
Phylopflank-0.030747662500000016
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure