Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGGGGCATGGAGAGGTCTGAGTACCTCGGCCGCGGCGCAC
.(((.((((((((((..((((&.))))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_174855
GeneSymbolIDH3B
Binding site85,127
Score0.923
Seed0
Au0.279
Energy-24.6
Binding len19
Me-8.145
Phylopstem0.15725740000000007
Phylopflank-0.03315518250000003
Longest consecutive pairings17
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure