Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTTTGCAAAATCTAAAGACGCAGAAACAACTAATGTAGCTGCAGA
((((((((((((((((.....&.))))))...)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_174878
GeneSymbolCLRN1
Binding site658,705
Score1.0
Seed1
Au0.647
Energy-21.8
Binding len21
Me-3.938
Phylopstem2.1846879315789476
Phylopflank2.044729085
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure