Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCCCTGAAGACAGCACTACAAGTCTGGGGGAGCCAGTT
.((((((((((((.(..((((.&.))))..)...)))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_174887
GeneSymbolIFT20
Binding site782,822
Score1.0
Seed1
Au0.441
Energy-23.3
Binding len24
Me-4.883
Phylopstem2.0125241666666667
Phylopflank3.0252789575000003
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure