Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGGCGCCGCCTTCACGAAGCTCGGGGAGCTGACGATGCAGCTGCAT
.(((((((((.((((((((((&.)))))...................)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_174893
GeneSymbolC17orf49
Binding site118,166
Score0.923
Seed1
Au0.338
Energy-22.8
Binding len40
Me-6.618
Phylopstem0.04894366896551724
Phylopflank-0.3149993549999999
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure