Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCTCAGAGAAGGAAACTGAGGTCCACCGAGTTGGAGAAACCTACTCAACACCAGGACTAACTTCTTCAGTGC
(((((((((((((((((((((.&))))))))))).......................)))).............................)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001349385
GeneSymbolSLC38A9
Binding site111,185
Score0.827
Seed1
Au0.603
Energy-20.1
Binding len74
Me-3.938
Phylopstem0.7299846698630136
Phylopflank0.08130501875
Longest consecutive pairings11
Position of longest consecutive pairings63
Pairings in 3prime end7
Position5UTR
2D Structure