Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCTGCCATGAACAAGAGAATTCATTACTACAGCCGGCTCACCACTCCTGCAGA
((((((...((((((((((((&))))..........................))))))))...........)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001349385
GeneSymbolSLC38A9
Binding site381,437
Score0.846
Seed0
Au0.471
Energy-16.5
Binding len56
Me-8.851
Phylopstem0.2499896631578947
Phylopflank0.23978729375000002
Longest consecutive pairings8
Position of longest consecutive pairings18
Pairings in 3prime end8
PositionCDS
2D Structure