Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGTTTGGACTAGGAGCCCCGCGGTCGCAAA
((((.(((((((......(((&.)))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001349385
GeneSymbolSLC38A9
Binding site15,47
Score0.885
Seed0
Au0.471
Energy-17.6
Binding len17
Me-11.171
Phylopstem-0.08177647142857149
Phylopflank0.15606701402777778
Longest consecutive pairings10
Position of longest consecutive pairings6
Pairings in 3prime end3
Position5UTR
2D Structure