Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTTACAACCAGCAGCAGCAT
.(((.((((((((((((((((&))))))))))).))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_174908
GeneSymbolCCDC50
Binding site4382,4404
Score0.923
Seed0
Au0.662
Energy-27.7
Binding len22
Me-7.912
Phylopstem0.19107677764705885
Phylopflank0.461616893
Longest consecutive pairings11
Position of longest consecutive pairings11
Pairings in 3prime end8
Position3UTR
2D Structure