Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CCCGGGGAGGAGTGAGG
..((.(((((((((((((....&))))))))))))).)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001330508
GeneSymbolCCDC40
Binding site2079,2096
Score0.846
Seed0
Au0.5
Energy-26.7
Binding len17
Me-9.076
Phylopstem-0.06488200000000001
Phylopflank-0.2538757825
Longest consecutive pairings13
Position of longest consecutive pairings4
Pairings in 3prime end4
Position3UTR
2D Structure