Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGAAACCGCTTTGTCGCGTGTGGGCTGCT
..((((((((((((.(((((.&))))).)))))).............)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_174913
GeneSymbolNOP9
Binding site457,489
Score0.923
Seed1
Au0.412
Energy-22.7
Binding len32
Me-5.692
Phylopstem0.6940000000000001
Phylopflank1.1325438875000002
Longest consecutive pairings6
Position of longest consecutive pairings20
Pairings in 3prime end6
PositionCDS
2D Structure