Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCGGAGCAGCCGCAGCC
.....(((((((((((..((.&))...))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_174921
GeneSymbolSMIM14
Binding site27,44
Score0.846
Seed0
Au0.338
Energy-23.0
Binding len17
Me-13.666
Phylopstem2.683212272727273
Phylopflank2.8214162719545457
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure