Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGGCCAACCACATCTCCCTGCTGTG
..(((((((.((((((((((.&)))))..))))).)).......))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_174927
GeneSymbolSPATA19
Binding site639,667
Score0.846
Seed1
Au0.397
Energy-16.8
Binding len28
Me-6.2
Phylopstem5.491911583333333
Phylopflank3.4174024375
Longest consecutive pairings5
Position of longest consecutive pairings23
Pairings in 3prime end7
Position3UTR
2D Structure