Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTCAGAAGAAGCCAGCGA
(.((((((.(.(((((((....&)))))))).)))))).).
Details
MiRNAhsa-miR-892b
RefseqIDNM_174931
GeneSymbolGPATCH11
Binding site561,579
Score0.923
Seed1
Au0.544
Energy-19.2
Binding len18
Me-8.982
Phylopstem4.161116428571429
Phylopflank2.59206167875
Longest consecutive pairings8
Position of longest consecutive pairings10
Pairings in 3prime end4
PositionCDS
2D Structure