Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTCTACGGCGCTGAACCGGGGCGAGCAGA
((((.(((.(((((.......&.))))).)))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_174931
GeneSymbolGPATCH11
Binding site13,43
Score0.846
Seed0
Au0.397
Energy-17.6
Binding len17
Me-10.081
Phylopstem0.6601338
Phylopflank0.43001269500000006
Longest consecutive pairings5
Position of longest consecutive pairings11
Pairings in 3prime end1
Position5UTR
2D Structure