Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TGCAGAGAGGGGCCCTGGTCCTCATCCATGGAGAAGTGG
((((((((((((((((.(....&).))))))))))))....................)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_174933
GeneSymbolPHYHD1
Binding site1518,1557
Score0.923
Seed1
Au0.441
Energy-23.1
Binding len39
Me-3.938
Phylopstem0.8544960222222224
Phylopflank1.5556811087499998
Longest consecutive pairings12
Position of longest consecutive pairings25
Pairings in 3prime end3
PositionCDS
2D Structure