Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCACAGAGGTAGTGAGCCAGTGT
(((((((((((((((((((...&))).)))))..)).))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_174934
GeneSymbolSCN4B
Binding site1629,1653
Score0.846
Seed1
Au0.382
Energy-26.7
Binding len24
Me-3.938
Phylopstem4.427661030434781
Phylopflank2.8823382499999997
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure