Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCTCAGGAAGGGGCCC
....(((((((((((((((...&))))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_174934
GeneSymbolSCN4B
Binding site1546,1562
Score0.923
Seed0
Au0.368
Energy-26.6
Binding len16
Me-9.547
Phylopstem5.310714533333331
Phylopflank2.7095021674999997
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure