Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTCTACGCCATTGCCAGGTG
((((((((.....(((((((..&)))))))....)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_174936
GeneSymbolPCSK9
Binding site1847,1867
Score0.846
Seed1
Au0.353
Energy-21.2
Binding len20
Me-13.697
Phylopstem-0.279078625
Phylopflank-0.09048671000000001
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure