Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCTCTATGCCAGGC
.(((((((((....(((((...&)))))..))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_174936
GeneSymbolPCSK9
Binding site2988,3005
Score0.923
Seed1
Au0.441
Energy-20.5
Binding len17
Me-12.111
Phylopstem-0.4131855444444444
Phylopflank-0.23612762375000013
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure