Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCCAGCGACTGCAGCACCTGCT
..((((((((((((((.((((&))))...)))))))))))...))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_174936
GeneSymbolPCSK9
Binding site1400,1425
Score0.923
Seed1
Au0.441
Energy-24.5
Binding len25
Me-4.957
Phylopstem0.20184952941176468
Phylopflank0.30094
Longest consecutive pairings11
Position of longest consecutive pairings7
Pairings in 3prime end7
PositionCDS
2D Structure