Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCACAGCCGTCGCCCGCTGCGCCCCAGATGAGGAGCTGCT
..((((((((((((((..(((&))))))))))).......................)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_174936
GeneSymbolPCSK9
Binding site1700,1741
Score0.846
Seed1
Au0.338
Energy-21.0
Binding len41
Me-4.957
Phylopstem0.37990174054054054
Phylopflank0.19654637500000005
Longest consecutive pairings11
Position of longest consecutive pairings30
Pairings in 3prime end6
PositionCDS
2D Structure