Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGGCCCTGAGCCTCCCGCTCGCTCCCCACGGCCGCGGTGCAT
.((((.((((((((((..((.&.))..)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_174938
GeneSymbolFRMD3
Binding site128,172
Score0.923
Seed0
Au0.279
Energy-23.5
Binding len20
Me-5.694
Phylopstem1.3417640999999998
Phylopflank1.04416116125
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure